Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09995 Daphniyunnine D 341.2004 342.2073 167
P10528 Etoperidone 377.1934 378.2001 167
P18446 1080.3689 1081.3767 167
P22504 Swietenidin B 205.0736 206.0805 167
P30111 Trifoliolasine D 783.2994 784.3081 167
P30296 1006.3388 1007.3447 167
P35381 898.3478 899.3586 167
P38138 Semapimod 744.4382 745.4471 167
P41379 11-Hydroxy-9-tridecenoic acid 228.1769 229.1859 167
P43251 Auriculatin 420.1577 421.1647 167

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G027200 hypothetical protein AT5G15400:AT5G15400:U-box domain-containing protein 29
Glyma.20G019900 hypothetical protein NA 29
Glyma.20G026300 hypothetical protein AT1G26560:BGLU40:beta glucosidase 40 29
Glyma.01G154500 hypothetical protein AT1G31780:AT1G31780:oligomeric golgi complex subunit 28
Glyma.01G171900 hypothetical protein AT5G66460:MAN7:Glycosyl hydrolase superfamily protein 28
Glyma.01G172900 hypothetical protein NA 28
Glyma.02G204500 hypothetical protein NA 28
Glyma.03G021100 hypothetical protein AT1G12650:AT1G12650:rRNA biosis RRP36-like protein 28
Glyma.05G154000 hypothetical protein NA 28
Glyma.06G185400 hypothetical protein AT5G65200:PUB38:plant U-box 38 28