Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P00589 | Lykurim | 364.0967 | 365.1018 | 159 |
| P00715 | Loviride | 350.0610 | 351.0678 | 159 |
| P03958 | Asperpyrone A | 572.1410 | 573.1433 | 159 |
| P05872 | Formebolone | 344.2031 | 345.2088 | 159 |
| P08490 | Torokonine | 449.2231 | 450.2264 | 159 |
| P10909 | 7-(3-((3-Formylphenoxy)methyl)-1,5-dimethyl-1H-pyrazol-4-yl)-3-(3-(naphthalen-1-yloxy)propyl)-1H-indole-2-carboxylic acid | 573.2300 | 574.2360 | 159 |
| P13378 | (L-Threonyl)adenylate | 448.1096 | 449.1147 | 159 |
| P17048 | 761.2212 | 762.2314 | 159 | |
| P19069 | 353.5640 | 354.5707 | 159 | |
| P29235 | 467.7279 | 468.7315 | 159 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.11G221000 | RCA11 | AT2G39730:RCA:rubisco activase | 29 | |
| Glyma.12G212500 | hypothetical protein | NA | 29 | |
| Glyma.13G052100 | hypothetical protein | NA | 29 | |
| Glyma.13G068200 | hypothetical protein | AT5G14940:AT5G14940:Major facilitator superfamily protein | 29 | |
| Glyma.14G035600 | hypothetical protein | AT5G19380:CLT1:CRT (chloroquine-resistance transporter)-like transporter 1__AT5G12170:CLT3:CRT (chloroquine-resistance transporter)-like transporter 3 | 29 | |
| Glyma.15G222600 | hypothetical protein | NA | 29 | |
| Glyma.16G167800 | hypothetical protein | AT1G03190:UVH6:RAD3-like DNA-binding helicase protein | 29 | |
| Glyma.17G250800 | hypothetical protein | NA | 29 | |
| Glyma.19G006200 | hypothetical protein | NA | 29 | |
| Glyma.19G009900 | hypothetical protein | NA | 29 |