Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P34058 | UDP-L-threo-4-pentosulose | 374.0961 | 375.1020 | 197 |
| P47411 | 548.7589 | 549.7687 | 197 | |
| P47617 | (15Z)-15-Nitro-3,3'-dihydroxy-beta,beta-carotene-4,4'-dione | 641.3622 | 642.3738 | 197 |
| P13624 | OR-1896 | 245.1148 | 246.1225 | 196 |
| P17077 | Goodyerin | 776.2009 | 777.2050 | 196 |
| P23832 | Zanamivir | 332.1323 | 333.1393 | 196 |
| P34403 | Theaflavic acid | 428.0716 | 429.0795 | 196 |
| P42118 | 677.3706 | 678.3757 | 196 | |
| P11897 | 2-Amino-3-(3-fluoro-4,5-dihydroxyphenyl)propanoic acid | 215.0615 | 216.0681 | 195 |
| P13878 | 5-Methoxy-3,4-methylenedioxyamphetamine | 209.1074 | 210.1163 | 195 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.19G126000 | CYP98A2 | cytochrome P450 98A2 | AT2G40890:CYP98A3:cytochrome P450, family 98, subfamily A, polypeptide 3 | 30 |
| Glyma.01G235200 | hypothetical protein | AT1G05460:SDE3:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 29 | |
| Glyma.03G046200 | hypothetical protein | NA | 29 | |
| Glyma.03G154000 | hypothetical protein | NA | 29 | |
| Glyma.04G098400 | hypothetical protein | AT1G22490:AT1G22490:basic helix-loop-helix (bHLH) DNA-binding superfamily protein__AT1G72210:AT1G72210:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 29 | |
| Glyma.04G180900 | hypothetical protein | NA | 29 | |
| Glyma.07G059100 | hypothetical protein | NA | 29 | |
| Glyma.07G243600 | hypothetical protein | NA | 29 | |
| Glyma.08G114200 | hypothetical protein | AT4G08810:SUB1:calcium ion binding protein | 29 | |
| Glyma.09G039000 | hypothetical protein | NA | 29 |