Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P37253 913.9687 914.9746 146
P44756 Methyl (2E)-2-(10,13-dimethyl-11-oxo-3-pyrrolidin-1-yl-2,7,8,9,12,14,15,16-octahydro-1H-cyclopenta[a]phenanthren-17-ylidene)acetate 409.2568 410.2631 146
P07505 Benzamide, 5-((1,5-bis(4-methoxyphenyl)-1H-pyrazol-3-yl)dimethoxymethyl)-2-chloro- 507.1535 508.1626 145
P07895 Sporovexin C 309.1220 310.1320 145
P10934 Asperuloide C 602.2568 603.2623 145
P14156 Validamycin G 513.2050 514.2127 145
P16247 Petasiphyll A 650.2751 651.2810 145
P21485 Newbouldioside C 976.3055 977.3181 145
P32522 Almitrine 477.2433 478.2469 145
P35761 3,13-Di-O-beta-D-glucopyranosilgeranyllinalol 630.3675 631.3783 145

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G183800 hypothetical protein NA 30
Glyma.08G295700 hypothetical protein NA 30
Glyma.08G297500 hypothetical protein AT2G02790:IQD29:IQ-domain 29 30
Glyma.11G106400 CYP41 peptidyl-prolyl cis-trans isomerase CYP41 AT4G34960:AT4G34960:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 30
Glyma.11G236800 hypothetical protein AT5G09360:LAC14:laccase 14 30
Glyma.11G237100 hypothetical protein NA 30
Glyma.12G021200 hypothetical protein NA 30
Glyma.16G180800 hypothetical protein AT1G02260:AT1G02260:Divalent ion symporter 30
Glyma.17G064100 hypothetical protein AT5G57490:VDAC4:voltage dependent anion channel 4 30
Glyma.18G110500 hypothetical protein NA 30