Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55480 3-(1-Pyrrolidinyl)-2-butanone 141.1144 142.1216 —
P55482 Vorozole 324.0895 325.0987 —
P55483 Antibiotic BN 186B 383.1954 384.2024 —
P55484 Ethyl menthane carboxamide 211.1925 212.2000 —
P55485 239.2236 240.2311 —
P55488 Nicergoline 483.1183 484.1258 —
P55489 Aristolactam I N-beta-glucoside 455.1232 456.1315 —
P55491 260.8854 261.8930 —
P55492 Tecostanine 183.1600 184.1676 —
P55493 gamma-Glutamyltyramine 266.1228 267.1290 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1,072
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1,067
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1,045
Glyma.12G205900 hypothetical protein NA 1,040
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1,038
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1,037
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1,034
Glyma.04G086600 hypothetical protein NA 1,022
Glyma.09G277300 hypothetical protein NA 1,013
Glyma.13G203700 hypothetical protein NA 1,000