Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55418 216.8746 217.8826 —
P55419 (+)-Neoacrimarine-H 567.1910 568.1955 —
P55425 N-[(2S)-3-[4-[2-(5-Methyl-2-phenyl-1,3-oxazol-4-yl)ethoxy]phenyl]-2-[[(Z)-4-oxo-4-[4-(trifluoromethyl)phenyl]but-2-en-2-yl]amino]propyl]propanamide 619.2572 620.2615 —
P55430 Tricornoside D 536.1464 537.1540 —
P55431 Luteolin 7-(2''-glucosyllactate) 520.1280 521.1380 —
P55433 24-ethyl-5alpha-cholest-25-en-3alpha,12alpha,16alpha-triol 446.3686 447.3753 —
P55434 Foetisulfide A 224.0393 225.0460 —
P55435 Butyl-meta-cycloheptylprodiginine 391.2601 392.2651 —
P55439 (4S*,6S*)-Dihydroxy-6-(14'Z-nonadecenyl)-2-cyclohexenone 392.3353 393.3424 —
P55441 538.1411 539.1490 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1,072
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1,067
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1,045
Glyma.12G205900 hypothetical protein NA 1,040
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1,038
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1,037
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1,034
Glyma.04G086600 hypothetical protein NA 1,022
Glyma.09G277300 hypothetical protein NA 1,013
Glyma.13G203700 hypothetical protein NA 1,000