Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11356 6-O-Acetylscutehenanine A 495.2297 496.2346 118
P14899 Mopidralazine 273.1588 274.1671 118
P15486 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1086 503.1184 118
P15867 Symlandine 381.2110 382.2174 118
P15915 Methionine sulfone 181.0438 182.0519 118
P17609 N,N-Didesmethyltramadol 235.1563 236.1631 118
P20973 SB 243213 428.1449 429.1530 118
P28706 Stemphyloxin I 382.2320 383.2393 118
P29385 Acarbose 645.2529 646.2627 118
P29481 TRIPARANOL 437.2060 438.2140 118

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1,072
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1,067
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1,045
Glyma.12G205900 hypothetical protein NA 1,040
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1,038
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1,037
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1,034
Glyma.04G086600 hypothetical protein NA 1,022
Glyma.09G277300 hypothetical protein NA 1,013
Glyma.13G203700 hypothetical protein NA 1,000