Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55327 8,8''-Biskoenigine 616.2599 617.2636 —
P55329 607.7540 608.7639 —
P55341 Tetraphenylporphyrin 614.2471 615.2555 —
P55343 624.9928 625.9968 —
P55350 609.0479 610.0613 —
P55357 339.0868 340.0942 —
P55361 Aerobactin 564.2333 565.2435 —
P55362 L-gamma-Glutamyl-beta-phenyl-beta-L-alanine 294.1177 295.1250 —
P55363 331.5836 332.5907 —
P55366 Dexrazoxane 268.1177 269.1254 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G045800 hypothetical protein AT3G02710:AT3G02710:ARM repeat superfamily protein 31
Glyma.18G274100 hypothetical protein AT5G38880:AUG5:HAUS augmin-like complex subunit 31
Glyma.01G176400 hypothetical protein AT1G63810:AT1G63810:nucleolar protein 30
Glyma.02G112500 hypothetical protein AT1G69400:AT1G69400:Transducin/WD40 repeat-like superfamily protein 30
Glyma.02G112900 hypothetical protein AT2G03350:AT2G03350:DUF538 family protein (Protein of unknown function, DUF538) 30
Glyma.05G147900 hypothetical protein AT1G27340:LCR:Galactose oxidase/kelch repeat superfamily protein 30
Glyma.05G166800 SHOOT1 SHOOT1 protein AT1G55480:ZKT:protein containing PDZ domain, a K-box domain, and a TPR region 30
Glyma.06G093300 hypothetical protein NA 30
Glyma.06G289600 hypothetical protein AT5G51740:AT5G51740:Peptidase family M48 family protein 30
Glyma.08G114000 hypothetical protein AT5G46430:AT5G46430:Ribosomal protein L32e 30