Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P19549 Difloxacin 399.1411 400.1484 192
P21953 Nordenletin 556.2090 557.2123 192
P25017 CDP-DG(20:1(11Z)/TXB2) 1121.5707 1122.5740 192
P25100 762.2022 763.2058 192
P26566 703.2717 704.2750 192
P32490 Juncin K 706.3299 707.3398 192
P34067 2-[5-Methoxy-2-methyl-1-[(4-methylsulfanylphenyl)methyl]indol-3-yl]propanoic acid 369.1393 370.1469 192
P35251 Mycothiazole-4,19-diol 438.2197 439.2304 192
P41427 Cadensin B 482.1216 483.1254 192
P42403 Artomunoxanthentrione epoxide 462.1286 463.1370 192

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G045800 hypothetical protein AT3G02710:AT3G02710:ARM repeat superfamily protein 31
Glyma.18G274100 hypothetical protein AT5G38880:AUG5:HAUS augmin-like complex subunit 31
Glyma.01G176400 hypothetical protein AT1G63810:AT1G63810:nucleolar protein 30
Glyma.02G112500 hypothetical protein AT1G69400:AT1G69400:Transducin/WD40 repeat-like superfamily protein 30
Glyma.02G112900 hypothetical protein AT2G03350:AT2G03350:DUF538 family protein (Protein of unknown function, DUF538) 30
Glyma.05G147900 hypothetical protein AT1G27340:LCR:Galactose oxidase/kelch repeat superfamily protein 30
Glyma.05G166800 SHOOT1 SHOOT1 protein AT1G55480:ZKT:protein containing PDZ domain, a K-box domain, and a TPR region 30
Glyma.06G093300 hypothetical protein NA 30
Glyma.06G289600 hypothetical protein AT5G51740:AT5G51740:Peptidase family M48 family protein 30
Glyma.08G114000 hypothetical protein AT5G46430:AT5G46430:Ribosomal protein L32e 30