Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55161 1-dimethylarsinoyl-decane 262.1259 263.1321 —
P55163 2-Propylphenol 136.0890 409.2738 —
P55165 601.4141 602.4200 —
P55167 17-(4-Hydroxyphenyl)heptadecanoyl adenylate 691.3377 692.3438 —
P55169 265.2467 266.2533 —
P55170 12R-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-tridecanoic acid 503.2855 504.2909 —
P55171 Phyllanthusmin C 512.1315 513.1352 —
P55175 Aspergilone A 386.1888 387.1962 —
P55176 2-Benzyl-aminoethanol 151.0991 454.3046 —
P55179 Chatferin 336.2268 337.2331 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G052500 hypothetical protein AT3G19760:EIF4A-III:eukaryotic initiation factor 4A-III__AT1G51380:AT1G51380:DEA(D/H)-box RNA helicase family protein 31
Glyma.10G261100 hypothetical protein NA 31
Glyma.11G015300 hypothetical protein AT3G60500:CER7:3'-5'-exoribonuclease family protein 31
Glyma.13G062700 hypothetical protein AT3G01180:SS2:starch synthase 2 31
Glyma.13G062800 hypothetical protein AT5G48600:SMC3:structural maintenance of chromosome 3 31
Glyma.15G024400 hypothetical protein AT1G17620:AT1G17620:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 31
Glyma.15G172900 hypothetical protein AT5G57070:AT5G57070:hydroxyproline-rich glycoprotein family protein 31
Glyma.16G145400 hypothetical protein AT3G12090:TET6:tetraspanin6 31
Glyma.18G027300 hypothetical protein NA 31
Glyma.18G045600 hypothetical protein NA 31