Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P42119 | 921.9813 | 922.9917 | 173 | |
| P44185 | (9E)-Dodecenoylcarnitine | 341.2519 | 342.2599 | 173 |
| P52922 | Malachite green | 328.1969 | 329.2060 | 173 |
| P55415 | 421.3709 | 422.3785 | 173 | |
| P10915 | 757.1991 | 758.2064 | 172 | |
| P17621 | o-Benzoquinone | 108.0194 | 109.0278 | 172 |
| P18759 | 760.1825 | 761.1938 | 172 | |
| P21076 | 2,5-Dioxopyrrolidin-1-yl 4-(bis(4-chlorophenyl)methyl)piperazine-1-carboxylate | 461.0890 | 462.0939 | 172 |
| P31391 | 297.0583 | 298.0641 | 172 | |
| P36809 | (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine | 204.1488 | 205.1568 | 172 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.09G052500 | hypothetical protein | AT3G19760:EIF4A-III:eukaryotic initiation factor 4A-III__AT1G51380:AT1G51380:DEA(D/H)-box RNA helicase family protein | 31 | |
| Glyma.10G261100 | hypothetical protein | NA | 31 | |
| Glyma.11G015300 | hypothetical protein | AT3G60500:CER7:3'-5'-exoribonuclease family protein | 31 | |
| Glyma.13G062700 | hypothetical protein | AT3G01180:SS2:starch synthase 2 | 31 | |
| Glyma.13G062800 | hypothetical protein | AT5G48600:SMC3:structural maintenance of chromosome 3 | 31 | |
| Glyma.15G024400 | hypothetical protein | AT1G17620:AT1G17620:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family | 31 | |
| Glyma.15G172900 | hypothetical protein | AT5G57070:AT5G57070:hydroxyproline-rich glycoprotein family protein | 31 | |
| Glyma.16G145400 | hypothetical protein | AT3G12090:TET6:tetraspanin6 | 31 | |
| Glyma.18G027300 | hypothetical protein | NA | 31 | |
| Glyma.18G045600 | hypothetical protein | NA | 31 |