Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P22734 Apigenosylide A 858.3447 859.3527 142
P32552 Briaexcavatolide N 480.1962 481.2002 142
P43465 907.9905 908.9925 142
P44266 Tylosin B 771.4372 772.4436 142
P53116 243.8782 244.8856 142
P04648 (5S)-5-(7-Benzofuranyl)-8-chloro-3-methyl-1,2,4,5-tetrahydro-3-benzazepin-7-ol 327.1057 328.1121 141
P05425 Flucythrinate 451.1546 452.1637 141
P06073 Indol-3-ylacetyl-myo-inositol L-arabinoside 469.1542 470.1624 141
P07929 Glycozolone A 252.1271 253.1325 141
P09365 Leucyl-Aspartate 246.1187 247.1238 141

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G149900 hypothetical protein NA 32
Glyma.20G222800 hypothetical protein AT3G04760:AT3G04760:Pentatricopeptide repeat (PPR-like) superfamily protein 32
Glyma.01G039400 hypothetical protein AT1G10417:AT1G10417:RUN/FYVE domain protein 31
Glyma.03G006000 hypothetical protein AT1G08680:ZIGA4:ARF GAP-like zinc finger-containing protein ZIGA4 31
Glyma.03G017500 hypothetical protein NA 31
Glyma.05G123300 hypothetical protein NA 31
Glyma.06G073700 hypothetical protein AT2G25660:emb2410:embryo defective 2410 31
Glyma.06G074700 hypothetical protein AT2G25730:AT2G25730:zinc finger FYVE domain protein 31
Glyma.08G124200 hypothetical protein AT1G30500:NF-YA7:nuclear factor Y, subunit A7 31
Glyma.09G019400 hypothetical protein AT1G55270:AT1G55270:Galactose oxidase/kelch repeat superfamily protein 31