Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P26031 Metoprolol 267.1800 268.1874 149
P29319 631.7931 632.7963 149
P29919 1,10-Epoxy-aristolane 220.1810 441.3700 149
P37738 Taxuspine A 728.3220 729.3304 149
P41603 TMC 96 356.1940 357.2010 149
P41889 Labradimil 1097.5501 1098.5538 149
P44481 1-dodecanoyl-2-tetradecanoyl-glycero-3-phospho-(1'-myo-inositol) 726.4307 727.4379 149
P47929 CJ 14877 211.0862 212.0930 149
P48259 1a,1b-dihomo-5,9,11-trihydroxy-6E,14Z-prostadienoic acid-cyclo[8,12] 382.2739 383.2824 149
P49915 (6Z,8Z)-Hexadeca-6,8-dienedioylcarnitine 425.2704 426.2768 149

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G149900 hypothetical protein NA 32
Glyma.20G222800 hypothetical protein AT3G04760:AT3G04760:Pentatricopeptide repeat (PPR-like) superfamily protein 32
Glyma.01G039400 hypothetical protein AT1G10417:AT1G10417:RUN/FYVE domain protein 31
Glyma.03G006000 hypothetical protein AT1G08680:ZIGA4:ARF GAP-like zinc finger-containing protein ZIGA4 31
Glyma.03G017500 hypothetical protein NA 31
Glyma.05G123300 hypothetical protein NA 31
Glyma.06G073700 hypothetical protein AT2G25660:emb2410:embryo defective 2410 31
Glyma.06G074700 hypothetical protein AT2G25730:AT2G25730:zinc finger FYVE domain protein 31
Glyma.08G124200 hypothetical protein AT1G30500:NF-YA7:nuclear factor Y, subunit A7 31
Glyma.09G019400 hypothetical protein AT1G55270:AT1G55270:Galactose oxidase/kelch repeat superfamily protein 31