Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55480 3-(1-Pyrrolidinyl)-2-butanone 141.1144 142.1216 —
P55482 Vorozole 324.0895 325.0987 —
P55483 Antibiotic BN 186B 383.1954 384.2024 —
P55484 Ethyl menthane carboxamide 211.1925 212.2000 —
P55485 239.2236 240.2311 —
P55488 Nicergoline 483.1183 484.1258 —
P55489 Aristolactam I N-beta-glucoside 455.1232 456.1315 —
P55491 260.8854 261.8930 —
P55492 Tecostanine 183.1600 184.1676 —
P55493 gamma-Glutamyltyramine 266.1228 267.1290 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G149900 hypothetical protein NA 32
Glyma.20G222800 hypothetical protein AT3G04760:AT3G04760:Pentatricopeptide repeat (PPR-like) superfamily protein 32
Glyma.01G039400 hypothetical protein AT1G10417:AT1G10417:RUN/FYVE domain protein 31
Glyma.03G006000 hypothetical protein AT1G08680:ZIGA4:ARF GAP-like zinc finger-containing protein ZIGA4 31
Glyma.03G017500 hypothetical protein NA 31
Glyma.05G123300 hypothetical protein NA 31
Glyma.06G073700 hypothetical protein AT2G25660:emb2410:embryo defective 2410 31
Glyma.06G074700 hypothetical protein AT2G25730:AT2G25730:zinc finger FYVE domain protein 31
Glyma.08G124200 hypothetical protein AT1G30500:NF-YA7:nuclear factor Y, subunit A7 31
Glyma.09G019400 hypothetical protein AT1G55270:AT1G55270:Galactose oxidase/kelch repeat superfamily protein 31