Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P41898 546.7256 547.7355 141
P45366 Dechlorobarbamide 426.0934 427.1001 141
P48034 Halaminol B 199.1920 200.1999 141
P48323 1-Oleoylglycerophosphocholine 521.3420 522.3497 141
P54222 671.1509 672.1589 141
P05856 Midodrine 254.1227 255.1311 140
P07220 Polyanethole-sulfate 228.0448 229.0527 140
P07629 741.0583 742.0664 140
P10273 5-Imino-2-methyl-1-cyclopenten-1-ol 111.0682 112.0755 140
P20165 (+)-Cheimonophyllal 282.1437 283.1503 140

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G132700 hypothetical protein NA 32
Glyma.09G231100 hypothetical protein AT5G42970:COP8:Proteasome component (PCI) domain protein 32
Glyma.10G192000 NF-YB1a NA 32
Glyma.12G096000 hypothetical protein AT1G08465:YAB2:Plant-specific transcription factor YABBY family protein 32
Glyma.13G149800 hypothetical protein AT2G36580:AT2G36580:Pyruvate kinase family protein 32
Glyma.13G202000 hypothetical protein NA 32
Glyma.17G008200 hypothetical protein NA 32
Glyma.17G154300 hypothetical protein AT5G46610:AT5G46610:aluminum activated malate transporter family protein 32
Glyma.18G079100 hypothetical protein NA 32
Glyma.18G206000 hypothetical protein NA 32