Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55585 611.1724 612.1787 —
P55586 Cadiamine 282.1961 565.4004 —
P55587 248.9018 249.9090 —
P55589 Chromoionophore I 583.4124 584.4189 —
P55590 106.5089 107.5161 —
P55591 Gallamonum 423.3521 424.3614 —
P55592 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2697 417.2779 —
P55593 627.2766 628.2811 —
P55596 Pyrido[2,3-d]pyrimidin-2(1H)-one, 4-cyclohexyl-1-ethyl-7-methyl- 271.1694 272.1771 —
P55599 423.3589 424.3642 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G132700 hypothetical protein NA 32
Glyma.09G231100 hypothetical protein AT5G42970:COP8:Proteasome component (PCI) domain protein 32
Glyma.10G192000 NF-YB1a NA 32
Glyma.12G096000 hypothetical protein AT1G08465:YAB2:Plant-specific transcription factor YABBY family protein 32
Glyma.13G149800 hypothetical protein AT2G36580:AT2G36580:Pyruvate kinase family protein 32
Glyma.13G202000 hypothetical protein NA 32
Glyma.17G008200 hypothetical protein NA 32
Glyma.17G154300 hypothetical protein AT5G46610:AT5G46610:aluminum activated malate transporter family protein 32
Glyma.18G079100 hypothetical protein NA 32
Glyma.18G206000 hypothetical protein NA 32