Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P55235		607.8970	608.9062	—
P55236	Norhygrine	127.0985	128.1063	—
P55237	Briaexcavatolide K	584.2479	585.2553	—
P55238		607.9278	608.9337	—
P55239		609.5829	610.5918	—
P55243		607.9804	608.9906	—
P55244	Beilschmieflavonoid A	614.2514	615.2599	—
P55246	Dicerandrol A	666.1878	667.1909	—
P55247		609.5259	610.5340	—
P55248	Ilmofosine	525.3701	526.3741	—

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.08G132700		hypothetical protein	NA	32
Glyma.09G231100		hypothetical protein	AT5G42970:COP8:Proteasome component (PCI) domain protein	32
Glyma.10G192000	NF-YB1a		NA	32
Glyma.12G096000		hypothetical protein	AT1G08465:YAB2:Plant-specific transcription factor YABBY family protein	32
Glyma.13G149800		hypothetical protein	AT2G36580:AT2G36580:Pyruvate kinase family protein	32
Glyma.13G202000		hypothetical protein	NA	32
Glyma.17G008200		hypothetical protein	NA	32
Glyma.17G154300		hypothetical protein	AT5G46610:AT5G46610:aluminum activated malate transporter family protein	32
Glyma.18G079100		hypothetical protein	NA	32
Glyma.18G206000		hypothetical protein	NA	32