Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55395 407.3585 408.3657 —
P55396 (2E)-4-Hydroxyhexadecenoylcarnitine 413.3150 414.3221 —
P55398 Guangsangon M 610.1764 611.1829 —
P55399 5-Oxooctyl glucosinolate 445.1089 446.1162 —
P55401 Saligcinnamide 490.3950 491.4025 —
P55402 Myobontioside B 554.1645 555.1716 —
P55405 Cer(d17:1/22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)) 627.4861 628.4955 —
P55407 Dibutylphthalic acid 278.1498 279.1577 —
P55414 Terminamine C 632.4352 633.4429 —
P55417 621.2630 622.2681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G132100 hypothetical protein NA 33
Glyma.15G140900 hypothetical protein AT3G66658:ALDH22A1:aldehyde dehydrogenase 22A1 33
Glyma.16G142800 hypothetical protein AT2G23760:BLH4:BEL1-like homeodomain 4 33
Glyma.16G143100 hypothetical protein AT2G23740:SUVR5:histone-lysine N-methyltransferase SUVR5 33
Glyma.16G143200 hypothetical protein AT5G66600:AT5G66600:electron transporter, putative (Protein of unknown function, DUF547) 33
Glyma.16G143600 hypothetical protein AT3G50820:PSBO2:photosystem II subunit O-2 33
Glyma.17G153900 hypothetical protein AT5G46580:AT5G46580:pentatricopeptide (PPR) repeat-containing protein 33
Glyma.18G079000 hypothetical protein NA 33
Glyma.04G188900 hypothetical protein NA 32
Glyma.05G147700 hypothetical protein NA 32