Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P55217	Cryptophycin 52	668.2910	669.3012	—
P55219	Anadur	506.3390	507.3476	—
P55221		609.0220	610.0260	—
P55224	Hicksoane C	608.0116	609.0195	—
P55225	Haloxyline B	435.3725	436.3803	—
P55226		690.1733	691.1811	—
P55227	Pectenol A	582.4057	583.4119	—
P55228		609.6882	610.6931	—
P55232		609.7950	610.7988	—
P55233		667.3010	668.3098	—

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.20G098100	hypothetical protein	AT1G56420:AT1G56420:antigenic heat-stable protein	34
Glyma.20G107300	hypothetical protein	AT2G16920:UBC23:ubiquitin-conjugating enzyme 23	34
Glyma.01G014800	hypothetical protein	NA	33
Glyma.01G170000	hypothetical protein	AT4G36380:ROT3:Cytochrome P450 superfamily protein	33
Glyma.07G033200	hypothetical protein	AT1G52770:AT1G52770:Phototropic-responsive NPH3 family protein	33
Glyma.07G058900	hypothetical protein	NA	33
Glyma.07G070200	hypothetical protein	AT1G20930:CDKB2;2:cyclin-dependent kinase B2;2	33
Glyma.10G194800	hypothetical protein	NA	33
Glyma.10G196000	hypothetical protein	NA	33
Glyma.14G033200	hypothetical protein	NA	33