Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55367 157.9660 158.9738 —
P55373 625.1241 626.1300 —
P55374 Pyridomacrolidin 581.2199 582.2304 —
P55377 607.8877 608.8918 —
P55379 Pre-alcaligin 422.2002 423.2039 —
P55381 Hydroxynybomycin 314.0896 315.0962 —
P55383 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1080 503.1150 —
P55387 257.9007 258.9083 —
P55389 (4R)-4-Hydroxyipecoside 581.2079 582.2145 —
P55390 Withaperuvin H 578.2554 579.2585 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.11G185200 hypothetical protein AT4G33790:CER4:Jojoba acyl CoA reductase-related male sterility protein 34
Glyma.11G185300 hypothetical protein AT3G44540:FAR4:fatty acid reductase 4 34
Glyma.11G185500 hypothetical protein AT5G20890:AT5G20890:TCP-1/cpn60 chaperonin family protein 34
Glyma.11G224000 hypothetical protein NA 34
Glyma.13G199800 hypothetical protein NA 34
Glyma.13G204000 hypothetical protein AT3G12650:AT3G12650:uncharacterized protein 34
Glyma.14G083200 hypothetical protein NA 34
Glyma.14G097400 hypothetical protein AT5G11960:AT5G11960:magnesium transporter, putative (DUF803) 34
Glyma.15G221200 hypothetical protein NA 34
Glyma.19G245800 hypothetical protein AT3G04690:ANX1:Malectin/receptor-like protein kinase family protein 34