Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P12304 Amrubicin 483.1476 484.1512 176
P17789 Kaempferol 3-neohesperidoside-7-(6''-malonylglucoside) 872.2263 873.2325 176
P20561 669.1601 670.1662 176
P29540 Kadsuphilol L 606.2044 607.2073 176
P29563 Sulfocostunolide A 312.1036 313.1116 176
P29935 Acantrifoside A 942.5143 943.5248 176
P36283 Isopropyl dodecylfluorophosphonate 294.2113 295.2185 176
P38088 365.6483 366.6561 176
P00499 1-Pentanesulfonic acid 152.0504 153.0569 175
P32791 Tenuecyclamide A 460.0996 461.1056 175

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.11G185200 hypothetical protein AT4G33790:CER4:Jojoba acyl CoA reductase-related male sterility protein 34
Glyma.11G185300 hypothetical protein AT3G44540:FAR4:fatty acid reductase 4 34
Glyma.11G185500 hypothetical protein AT5G20890:AT5G20890:TCP-1/cpn60 chaperonin family protein 34
Glyma.11G224000 hypothetical protein NA 34
Glyma.13G199800 hypothetical protein NA 34
Glyma.13G204000 hypothetical protein AT3G12650:AT3G12650:uncharacterized protein 34
Glyma.14G083200 hypothetical protein NA 34
Glyma.14G097400 hypothetical protein AT5G11960:AT5G11960:magnesium transporter, putative (DUF803) 34
Glyma.15G221200 hypothetical protein NA 34
Glyma.19G245800 hypothetical protein AT3G04690:ANX1:Malectin/receptor-like protein kinase family protein 34