Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P03225 Chlorambucil-tertiary butyl ester 359.1400 360.1461 210
P05139 310.6259 311.6315 210
P27684 309.2743 310.2795 210
P04549 Cyclosulfamuron 421.1071 422.1091 209
P13108 Bms-707035 410.1081 411.1142 209
P14970 Benzonaphthazepine 243.1062 244.1135 209
P44253 285.6155 286.6223 209
P50982 Oleamide 281.2671 282.2752 209
P16775 PA(10:0/13:0) 522.3343 523.3435 208
P20730 1-dodecanoyl-glycero-3-phospho-(1'-myo-inositol) 516.2330 517.2397 208

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.11G185200 hypothetical protein AT4G33790:CER4:Jojoba acyl CoA reductase-related male sterility protein 34
Glyma.11G185300 hypothetical protein AT3G44540:FAR4:fatty acid reductase 4 34
Glyma.11G185500 hypothetical protein AT5G20890:AT5G20890:TCP-1/cpn60 chaperonin family protein 34
Glyma.11G224000 hypothetical protein NA 34
Glyma.13G199800 hypothetical protein NA 34
Glyma.13G204000 hypothetical protein AT3G12650:AT3G12650:uncharacterized protein 34
Glyma.14G083200 hypothetical protein NA 34
Glyma.14G097400 hypothetical protein AT5G11960:AT5G11960:magnesium transporter, putative (DUF803) 34
Glyma.15G221200 hypothetical protein NA 34
Glyma.19G245800 hypothetical protein AT3G04690:ANX1:Malectin/receptor-like protein kinase family protein 34