Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55250 624.9316 625.9393 —
P55251 283.2792 284.2855 —
P55252 N1,N5,N10-Tricaffeoyl spermidine 631.2498 632.2512 —
P55253 608.9013 609.9125 —
P55258 608.9253 609.9268 —
P55259 608.6906 609.6976 —
P55260 624.9479 625.9558 —
P55262 6-Ketomyristic acid 242.1902 243.1973 —
P55265 Morellic acid 560.2383 561.2470 —
P55271 541.2613 542.2687 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G212200 hypothetical protein NA 35
Glyma.17G219300 hypothetical protein AT1G48270:GCR1:G-protein-coupled receptor 1 35
Glyma.18G090300 hypothetical protein AT5G55210:AT5G55210:uncharacterized protein 35
Glyma.18G268900 hypothetical protein AT3G02170:LNG2:longifolia2__AT5G15580:LNG1:longifolia1 35
Glyma.19G137700 hypothetical protein NA 35
Glyma.19G147000 hypothetical protein NA 35
Glyma.19G147100 hypothetical protein NA 35
Glyma.03G020500 hypothetical protein AT2G45610:AT2G45610:alpha/beta-Hydrolases superfamily protein 34
Glyma.08G031900 hypothetical protein AT4G29230:NAC075:NAC domain containing protein 75 34
Glyma.11G185000 hypothetical protein AT4G33790:CER4:Jojoba acyl CoA reductase-related male sterility protein 34