Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P31215 966.3363 967.3449 180
P37602 (6R)-9,10-Dihydroxy-4,7-megastigmadien-3-one-9-O-beta-D-glucopyranoside 386.1922 387.2002 180
P41095 423.3575 424.3622 180
P49211 Bamifylline 385.2106 386.2173 180
P06876 Lembyne A 342.0021 343.0076 179
P14986 N-(2-hydroxyhexadecanoyl)-sphinganine 555.5217 556.5296 179
P21946 999.3356 1000.3371 179
P23960 Upunaphenol N 934.2723 935.2842 179
P29027 Bazzanin J 492.0855 493.0949 179
P35945 475.1093 476.1172 179

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G212200 hypothetical protein NA 35
Glyma.17G219300 hypothetical protein AT1G48270:GCR1:G-protein-coupled receptor 1 35
Glyma.18G090300 hypothetical protein AT5G55210:AT5G55210:uncharacterized protein 35
Glyma.18G268900 hypothetical protein AT3G02170:LNG2:longifolia2__AT5G15580:LNG1:longifolia1 35
Glyma.19G137700 hypothetical protein NA 35
Glyma.19G147000 hypothetical protein NA 35
Glyma.19G147100 hypothetical protein NA 35
Glyma.03G020500 hypothetical protein AT2G45610:AT2G45610:alpha/beta-Hydrolases superfamily protein 34
Glyma.08G031900 hypothetical protein AT4G29230:NAC075:NAC domain containing protein 75 34
Glyma.11G185000 hypothetical protein AT4G33790:CER4:Jojoba acyl CoA reductase-related male sterility protein 34