Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55480 3-(1-Pyrrolidinyl)-2-butanone 141.1144 142.1216 —
P55482 Vorozole 324.0895 325.0987 —
P55483 Antibiotic BN 186B 383.1954 384.2024 —
P55484 Ethyl menthane carboxamide 211.1925 212.2000 —
P55485 239.2236 240.2311 —
P55488 Nicergoline 483.1183 484.1258 —
P55489 Aristolactam I N-beta-glucoside 455.1232 456.1315 —
P55491 260.8854 261.8930 —
P55492 Tecostanine 183.1600 184.1676 —
P55493 gamma-Glutamyltyramine 266.1228 267.1290 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G142000 hypothetical protein NA 35
Glyma.06G289900 hypothetical protein AT2G20590:AT2G20590:Reticulon family protein 35
Glyma.08G215400 hypothetical protein AT2G22750:AT2G22750:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 35
Glyma.10G055100 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 35
Glyma.13G170000 hypothetical protein AT3G01460:MBD9:methyl-CPG-binding domain 9 35
Glyma.14G045100 hypothetical protein AT3G43600:AAO2:aldehyde oxidase 2__AT1G04580:AO4:aldehyde oxidase 4__AT5G20960:AO1:aldehyde oxidase 1__AT2G27150:AAO3:abscisic aldehyde oxidase 3 35
Glyma.14G206900 hypothetical protein NA 35
Glyma.16G013900 hypothetical protein AT1G17290:AlaAT1:alanine aminotransferas 35
Glyma.16G014100 hypothetical protein AT1G53830:PME2:pectin methylesterase 2 35
Glyma.17G169100 hypothetical protein AT3G50210:AT3G50210:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein__AT3G49620:DIN11:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein__AT3G49630:AT3G49630:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 35