Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55327 8,8''-Biskoenigine 616.2599 617.2636 —
P55329 607.7540 608.7639 —
P55341 Tetraphenylporphyrin 614.2471 615.2555 —
P55343 624.9928 625.9968 —
P55350 609.0479 610.0613 —
P55357 339.0868 340.0942 —
P55361 Aerobactin 564.2333 565.2435 —
P55362 L-gamma-Glutamyl-beta-phenyl-beta-L-alanine 294.1177 295.1250 —
P55363 331.5836 332.5907 —
P55366 Dexrazoxane 268.1177 269.1254 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G142000 hypothetical protein NA 35
Glyma.06G289900 hypothetical protein AT2G20590:AT2G20590:Reticulon family protein 35
Glyma.08G215400 hypothetical protein AT2G22750:AT2G22750:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 35
Glyma.10G055100 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 35
Glyma.13G170000 hypothetical protein AT3G01460:MBD9:methyl-CPG-binding domain 9 35
Glyma.14G045100 hypothetical protein AT3G43600:AAO2:aldehyde oxidase 2__AT1G04580:AO4:aldehyde oxidase 4__AT5G20960:AO1:aldehyde oxidase 1__AT2G27150:AAO3:abscisic aldehyde oxidase 3 35
Glyma.14G206900 hypothetical protein NA 35
Glyma.16G013900 hypothetical protein AT1G17290:AlaAT1:alanine aminotransferas 35
Glyma.16G014100 hypothetical protein AT1G53830:PME2:pectin methylesterase 2 35
Glyma.17G169100 hypothetical protein AT3G50210:AT3G50210:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein__AT3G49620:DIN11:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein__AT3G49630:AT3G49630:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 35