Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55524 Triphenyl phosphate 326.0699 327.0759 —
P55527 583.4623 584.4696 —
P55529 282.6336 283.6414 —
P55535 (5Z)-3-decanoyloxy-dodecenoic acid 368.2867 369.2942 —
P55536 IM-2 188.1076 189.1141 —
P55538 TRIMELLITIC ANHYDRIDE 192.0027 193.0100 —
P55539 3-Acetoxy-hexadecanoic acid 314.2449 315.2510 —
P55543 258.8918 259.8994 —
P55544 Dovyalicin F 407.2564 408.2631 —
P55546 138.9783 139.9860 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G099300 hypothetical protein AT3G47610:AT3G47610:transcription regulator/ zinc ion binding protein 36
Glyma.18G052300 hypothetical protein NA 36
Glyma.18G089800 hypothetical protein AT5G55250:IAMT1:IAA carboxylmethyltransferase 1 36
Glyma.18G090500 hypothetical protein AT4G26810:AT4G26810:SWIB/MDM2 domain superfamily protein 36
Glyma.19G022500 hypothetical protein AT5G15230:GASA4:GAST1 protein homolog 4 36
Glyma.01G038800 hypothetical protein NA 35
Glyma.01G230800 hypothetical protein AT4G10050:AT4G10050:esterase/lipase/thioesterase family protein 35
Glyma.03G145800 hypothetical protein AT5G06710:HAT14:homeobox leucine zipper protein 35
Glyma.03G252800 hypothetical protein AT5G18430:AT5G18430:GDSL-like Lipase/Acylhydrolase superfamily protein 35
Glyma.04G062500 hypothetical protein NA 35