Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P19549 Difloxacin 399.1411 400.1484 192
P21953 Nordenletin 556.2090 557.2123 192
P25017 CDP-DG(20:1(11Z)/TXB2) 1121.5707 1122.5740 192
P25100 762.2022 763.2058 192
P26566 703.2717 704.2750 192
P32490 Juncin K 706.3299 707.3398 192
P34067 2-[5-Methoxy-2-methyl-1-[(4-methylsulfanylphenyl)methyl]indol-3-yl]propanoic acid 369.1393 370.1469 192
P35251 Mycothiazole-4,19-diol 438.2197 439.2304 192
P41427 Cadensin B 482.1216 483.1254 192
P42403 Artomunoxanthentrione epoxide 462.1286 463.1370 192

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G106900 hypothetical protein NA 1,140
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1,138
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1,126
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1,126
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1,116
Glyma.09G016500 hypothetical protein NA 1,110
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1,105
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1,087
Glyma.06G291800 hypothetical protein NA 1,075
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1,074