Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P40267 90720A 1040.4818 1041.4942 101
P40439 LysoPC(18:3(6Z,9Z,12Z)/0:0) 517.3124 518.3206 101
P41335 Manumycin A 550.2719 551.2807 101
P41614 (-)-Mehranine 310.2084 311.2157 101
P42130 PIP(18:2(10E,12Z)+=O(9)/20:2(11Z,14Z)) 980.5129 981.5213 101
P44523 3-[[2-(2-Benzoyl-N-[2-[(2-methylpropan-2-yl)oxy]-2-oxoethyl]anilino)-2-oxoethyl]carbamoylamino]benzoic acid 531.2013 532.2104 101
P52281 Albovionitine 389.2567 390.2634 101
P52302 7-Oxononane-1,1,9-tricarbaldehyde 226.1203 227.1264 101
P52372 cis-5-Tetradecenoylcarnitine 369.2922 370.2954 101
P52606 Jietacin B 324.2814 325.2884 101

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G106900 hypothetical protein NA 1,140
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1,138
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1,126
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1,126
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1,116
Glyma.09G016500 hypothetical protein NA 1,110
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1,105
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1,087
Glyma.06G291800 hypothetical protein NA 1,075
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1,074