Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P38571 | Madecassoside | 974.5044 | 975.5100 | 103 |
| P39613 | Carboxymethyl chitosan | 543.2297 | 544.2379 | 103 |
| P39803 | 2,3,4,5-tetranor-9S,11R,15S-trihydroxy-13E-prostenoic acid | 300.1905 | 301.1987 | 103 |
| P40626 | CDP-DG(i-18:0/18:2(9Z,11Z)) | 1005.5541 | 1006.5567 | 103 |
| P41044 | Hicksoane B | 482.1184 | 483.1260 | 103 |
| P41403 | Levetiracetam | 170.1061 | 171.1136 | 103 |
| P42139 | Alloeremophilone | 218.1653 | 437.3391 | 103 |
| P43927 | 649.4107 | 650.4226 | 103 | |
| P49594 | (+)-Mecambroline | 295.1231 | 296.1302 | 103 |
| P50391 | Rubescensin M | 682.4118 | 683.4174 | 103 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.20G106900 | hypothetical protein | NA | 1,140 | |
| Glyma.16G105400 | hypothetical protein | AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein | 1,138 | |
| Glyma.09G060300 | hypothetical protein | AT5G57140:PAP28:purple acid phosphatase 28 | 1,126 | |
| Glyma.20G109800 | hypothetical protein | AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein | 1,126 | |
| Glyma.11G064300 | hypothetical protein | AT4G36780:BEH2:BES1/BZR1 homolog 2 | 1,116 | |
| Glyma.09G016500 | hypothetical protein | NA | 1,110 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1,105 |
| Glyma.13G203300 | hypothetical protein | AT3G63530:BB:RING/U-box superfamily protein | 1,087 | |
| Glyma.06G291800 | hypothetical protein | NA | 1,075 | |
| Glyma.06G292200 | hypothetical protein | AT5G44290:AT5G44290:Protein kinase superfamily protein | 1,074 |