Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P15527 (1S,4R)-passicapsin 417.1645 418.1754 214
P17647 Quercetin 3-sambubioside-7-glucoside 758.1981 759.2019 214
P04012 N2,N5-Diacetylornithine 216.1093 217.1155 213
P14817 Delphinidin 3-(6-malonylglucoside)-5-glucoside 712.1486 713.1566 212
P48613 Emorfazone 239.1270 240.1348 212
P06958 Adafosbuvir 545.1626 546.1675 211
P12657 4,4'-Stilbenedicarboxamidine dihydrochloride 264.1403 265.1498 211
P22693 Propanoic acid, 3-((((2-(1,1-dimethylethyl)-5-methoxy-6-benzothiazolyl)amino)thioxomethyl)thio)- 384.0657 385.0746 211
P34892 Aristolin 629.2974 630.3072 211
P37540 PA(19:2(10Z,13Z)/20:4(5Z,8Z,11Z,13E)+=O(15)) 748.4711 749.4768 211

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G106900 hypothetical protein NA 1,140
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1,138
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1,126
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1,126
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1,116
Glyma.09G016500 hypothetical protein NA 1,110
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1,105
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1,087
Glyma.06G291800 hypothetical protein NA 1,075
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1,074