Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P00823 (-)-Mintlactone 306.0213 307.0281 164
P07492 Polypropylene glycol (m w 1,200-3,000) 134.0949 135.1012 164
P10281 Undeca-2,4,6-trienedioyl-CoA 959.2076 960.2157 164
P15662 513.2875 514.2951 164
P18935 Marchantin P 438.1840 439.1899 164
P22654 Excavatolide D 524.2197 525.2274 164
P32650 Thonzylamine 286.1756 287.1822 164
P34351 Arginylglutamine 302.1710 605.3489 164
P48467 13-Apo-beta-carotenone 258.1964 259.2031 164
P01110 (R)-11,12,13-Trinor-1(5),6,9-guaiatrien-8-one 174.1043 175.1111 163

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G010700 hypothetical protein AT3G13730:CYP90D1:cytochrome P450, family 90, subfamily D, polypeptide 1 36
Glyma.08G294800 hypothetical protein AT1G59710:AT1G59710:actin cross-linking protein (DUF569) 36
Glyma.09G056100 hypothetical protein AT2G18915:LKP2:LOV KELCH protein 2 36
Glyma.09G212100 hypothetical protein AT4G19040:EDR2:ENHANCED DISEASE RESISTANCE 2 36
Glyma.12G197500 hypothetical protein NA 36
Glyma.12G197800 hypothetical protein NA 36
Glyma.14G170900 hypothetical protein AT1G78060:AT1G78060:Glycosyl hydrolase family protein 36
Glyma.15G020300 hypothetical protein AT1G51950:IAA18:indole-3-acetic acid inducible 18__AT3G16500:PAP1:phytochrome-associated protein 1 36
Glyma.15G262400 hypothetical protein AT1G16310:AT1G16310:Cation efflux family protein__AT1G79520:AT1G79520:Cation efflux family protein 36
Glyma.16G139400 hypothetical protein AT3G50870:MNP:GATA type zinc finger transcription factor family protein 36