Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P19549 Difloxacin 399.1411 400.1484 192
P21953 Nordenletin 556.2090 557.2123 192
P25017 CDP-DG(20:1(11Z)/TXB2) 1121.5707 1122.5740 192
P25100 762.2022 763.2058 192
P26566 703.2717 704.2750 192
P32490 Juncin K 706.3299 707.3398 192
P34067 2-[5-Methoxy-2-methyl-1-[(4-methylsulfanylphenyl)methyl]indol-3-yl]propanoic acid 369.1393 370.1469 192
P35251 Mycothiazole-4,19-diol 438.2197 439.2304 192
P41427 Cadensin B 482.1216 483.1254 192
P42403 Artomunoxanthentrione epoxide 462.1286 463.1370 192

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G010700 hypothetical protein AT3G13730:CYP90D1:cytochrome P450, family 90, subfamily D, polypeptide 1 36
Glyma.08G294800 hypothetical protein AT1G59710:AT1G59710:actin cross-linking protein (DUF569) 36
Glyma.09G056100 hypothetical protein AT2G18915:LKP2:LOV KELCH protein 2 36
Glyma.09G212100 hypothetical protein AT4G19040:EDR2:ENHANCED DISEASE RESISTANCE 2 36
Glyma.12G197500 hypothetical protein NA 36
Glyma.12G197800 hypothetical protein NA 36
Glyma.14G170900 hypothetical protein AT1G78060:AT1G78060:Glycosyl hydrolase family protein 36
Glyma.15G020300 hypothetical protein AT1G51950:IAA18:indole-3-acetic acid inducible 18__AT3G16500:PAP1:phytochrome-associated protein 1 36
Glyma.15G262400 hypothetical protein AT1G16310:AT1G16310:Cation efflux family protein__AT1G79520:AT1G79520:Cation efflux family protein 36
Glyma.16G139400 hypothetical protein AT3G50870:MNP:GATA type zinc finger transcription factor family protein 36