Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P01325 7-Methoxymurrayacine 307.1223 308.1298 149
P07302 Melampyroside 450.1506 451.1589 149
P09071 888.1557 889.1645 149
P10311 2'-Cinnamoylsalicortin 554.1802 555.1831 149
P10689 1-(Pentafluorophenyl)propane 210.0480 211.0541 149
P14001 Quetiapine Sulfoxide 399.1540 400.1606 149
P16545 Sulfisomidine 278.0841 279.0918 149
P16940 5-Methylthiopentyldesulfoglucosinolate 355.1126 356.1217 149
P17252 Riddelliine N-oxide 365.1502 366.1570 149
P25789 10-Isovaleryl kanokoside C 722.3032 723.3071 149

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G184200 hypothetical protein NA 37
Glyma.19G002200 hypothetical protein NA 37
Glyma.20G217800 hypothetical protein AT1G32850:UBP11:ubiquitin-specific protease 11__AT4G10590:UBP10:ubiquitin-specific protease 10 37
Glyma.20G221400 hypothetical protein NA 37
Glyma.20G222300 hypothetical protein AT2G20410:AT2G20410:RNA-binding ASCH domain protein 37
Glyma.01G034800 hypothetical protein NA 36
Glyma.02G116700 hypothetical protein AT1G68980:AT1G68980:Tetratricopeptide repeat (TPR)-like superfamily protein__AT1G69290:AT1G69290:Pentatricopeptide repeat (PPR) superfamily protein 36
Glyma.02G116800 hypothetical protein NA 36
Glyma.05G220100 hypothetical protein AT1G33170:AT1G33170:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 36
Glyma.06G260300 hypothetical protein AT1G60730:AT1G60730:NAD(P)-linked oxidoreductase superfamily protein 36