Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P37887 | Starch acetate | 306.0940 | 307.1009 | 207 |
| P41794 | Xylogranatin A | 642.2652 | 643.2735 | 207 |
| P50979 | 261.2154 | 262.2224 | 207 | |
| P55337 | Fagopyrine | 670.2326 | 671.2406 | 207 |
| P18076 | (S)-4-(2,4-Difluoro-5-(pyrimidin-5-yl)phenyl)-4-methyl-5,6-dihydro-4H-1,3-thiazin-2-amine | 320.0919 | 321.0978 | 206 |
| P24832 | Stercobilin | 594.3421 | 595.3505 | 206 |
| P37255 | (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid | 454.3399 | 455.3477 | 206 |
| P08444 | (1R,6S)-6-Amino-5-oxocyclohex-2-ene-1-carboxylate | 155.0591 | 156.0664 | 205 |
| P13362 | Quercetin 3-coumaroyl-triglucoside | 488.1517 | 489.1566 | 205 |
| P15731 | HDMBOA-Glc | 387.1176 | 388.1224 | 205 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.18G184200 | hypothetical protein | NA | 37 | |
| Glyma.19G002200 | hypothetical protein | NA | 37 | |
| Glyma.20G217800 | hypothetical protein | AT1G32850:UBP11:ubiquitin-specific protease 11__AT4G10590:UBP10:ubiquitin-specific protease 10 | 37 | |
| Glyma.20G221400 | hypothetical protein | NA | 37 | |
| Glyma.20G222300 | hypothetical protein | AT2G20410:AT2G20410:RNA-binding ASCH domain protein | 37 | |
| Glyma.01G034800 | hypothetical protein | NA | 36 | |
| Glyma.02G116700 | hypothetical protein | AT1G68980:AT1G68980:Tetratricopeptide repeat (TPR)-like superfamily protein__AT1G69290:AT1G69290:Pentatricopeptide repeat (PPR) superfamily protein | 36 | |
| Glyma.02G116800 | hypothetical protein | NA | 36 | |
| Glyma.05G220100 | hypothetical protein | AT1G33170:AT1G33170:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 36 | |
| Glyma.06G260300 | hypothetical protein | AT1G60730:AT1G60730:NAD(P)-linked oxidoreductase superfamily protein | 36 |