Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55480 3-(1-Pyrrolidinyl)-2-butanone 141.1144 142.1216 —
P55482 Vorozole 324.0895 325.0987 —
P55483 Antibiotic BN 186B 383.1954 384.2024 —
P55484 Ethyl menthane carboxamide 211.1925 212.2000 —
P55485 239.2236 240.2311 —
P55488 Nicergoline 483.1183 484.1258 —
P55489 Aristolactam I N-beta-glucoside 455.1232 456.1315 —
P55491 260.8854 261.8930 —
P55492 Tecostanine 183.1600 184.1676 —
P55493 gamma-Glutamyltyramine 266.1228 267.1290 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.11G241200 hypothetical protein AT5G10320:AT5G10320:ATP synthase subunit B 37
Glyma.14G032900 hypothetical protein AT4G23820:AT4G23820:Pectin lyase-like superfamily protein 37
Glyma.14G063600 hypothetical protein AT5G05840:AT5G05840:replication factor C subunit, putative (DUF620) 37
Glyma.14G178800 hypothetical protein AT1G28210:ATJ1:DNAJ heat shock family protein 37
Glyma.17G007400 hypothetical protein NA 37
Glyma.17G258200 GASA29 gibberellin-regulated protein 29 NA 37
Glyma.18G033800 hypothetical protein NA 37
Glyma.18G044400 hypothetical protein AT3G03250:UGP1:UDP-GLUCOSE PYROPHOSPHORYLASE 1 37
Glyma.18G090100 hypothetical protein NA 37
Glyma.18G090800 hypothetical protein AT3G20300:AT3G20300:extracellular ligand-gated ion channel protein (DUF3537) 37