Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P26031 Metoprolol 267.1800 268.1874 149
P29319 631.7931 632.7963 149
P29919 1,10-Epoxy-aristolane 220.1810 441.3700 149
P37738 Taxuspine A 728.3220 729.3304 149
P41603 TMC 96 356.1940 357.2010 149
P41889 Labradimil 1097.5501 1098.5538 149
P44481 1-dodecanoyl-2-tetradecanoyl-glycero-3-phospho-(1'-myo-inositol) 726.4307 727.4379 149
P47929 CJ 14877 211.0862 212.0930 149
P48259 1a,1b-dihomo-5,9,11-trihydroxy-6E,14Z-prostadienoic acid-cyclo[8,12] 382.2739 383.2824 149
P49915 (6Z,8Z)-Hexadeca-6,8-dienedioylcarnitine 425.2704 426.2768 149

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G116600 hypothetical protein AT1G13770:RUS3:root UVB sensitive protein (Protein of unknown function, DUF647) 37
Glyma.02G117100 hypothetical protein AT2G03620:MGT3:magnesium transporter 3 37
Glyma.05G188500 hypothetical protein AT3G27740:CARA:carbamoyl phosphate synthetase A 37
Glyma.05G219800 TRE1 trehalase 1 AT4G24040:TRE1:trehalase 1 37
Glyma.06G260200 hypothetical protein AT1G60690:AT1G60690:NAD(P)-linked oxidoreductase superfamily protein__AT1G60710:ATB2:NAD(P)-linked oxidoreductase superfamily protein__AT1G60680:AT1G60680:NAD(P)-linked oxidoreductase superfamily protein__AT1G10810:AT1G10810:NAD(P)-linked oxidoreductase superfamily protein 37
Glyma.06G284900 BZIP50 bZIP transcription factor bZIP50 AT3G58120:BZIP61:Basic-leucine zipper (bZIP) transcription factor family protein__AT2G42380:BZIP34:Basic-leucine zipper (bZIP) transcription factor family protein 37
Glyma.06G304200 hypothetical protein AT1G04910:AT1G04910:O-fucosyltransferase family protein 37
Glyma.07G067000 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 37
Glyma.08G140900 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 37
Glyma.08G215500 hypothetical protein AT2G22750:AT2G22750:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 37