Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55327 8,8''-Biskoenigine 616.2599 617.2636 —
P55329 607.7540 608.7639 —
P55341 Tetraphenylporphyrin 614.2471 615.2555 —
P55343 624.9928 625.9968 —
P55350 609.0479 610.0613 —
P55357 339.0868 340.0942 —
P55361 Aerobactin 564.2333 565.2435 —
P55362 L-gamma-Glutamyl-beta-phenyl-beta-L-alanine 294.1177 295.1250 —
P55363 331.5836 332.5907 —
P55366 Dexrazoxane 268.1177 269.1254 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G116600 hypothetical protein AT1G13770:RUS3:root UVB sensitive protein (Protein of unknown function, DUF647) 37
Glyma.02G117100 hypothetical protein AT2G03620:MGT3:magnesium transporter 3 37
Glyma.05G188500 hypothetical protein AT3G27740:CARA:carbamoyl phosphate synthetase A 37
Glyma.05G219800 TRE1 trehalase 1 AT4G24040:TRE1:trehalase 1 37
Glyma.06G260200 hypothetical protein AT1G60690:AT1G60690:NAD(P)-linked oxidoreductase superfamily protein__AT1G60710:ATB2:NAD(P)-linked oxidoreductase superfamily protein__AT1G60680:AT1G60680:NAD(P)-linked oxidoreductase superfamily protein__AT1G10810:AT1G10810:NAD(P)-linked oxidoreductase superfamily protein 37
Glyma.06G284900 BZIP50 bZIP transcription factor bZIP50 AT3G58120:BZIP61:Basic-leucine zipper (bZIP) transcription factor family protein__AT2G42380:BZIP34:Basic-leucine zipper (bZIP) transcription factor family protein 37
Glyma.06G304200 hypothetical protein AT1G04910:AT1G04910:O-fucosyltransferase family protein 37
Glyma.07G067000 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 37
Glyma.08G140900 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 37
Glyma.08G215500 hypothetical protein AT2G22750:AT2G22750:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 37