Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55235 607.8970 608.9062 —
P55236 Norhygrine 127.0985 128.1063 —
P55237 Briaexcavatolide K 584.2479 585.2553 —
P55238 607.9278 608.9337 —
P55239 609.5829 610.5918 —
P55243 607.9804 608.9906 —
P55244 Beilschmieflavonoid A 614.2514 615.2599 —
P55246 Dicerandrol A 666.1878 667.1909 —
P55247 609.5259 610.5340 —
P55248 Ilmofosine 525.3701 526.3741 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G116600 hypothetical protein AT1G13770:RUS3:root UVB sensitive protein (Protein of unknown function, DUF647) 37
Glyma.02G117100 hypothetical protein AT2G03620:MGT3:magnesium transporter 3 37
Glyma.05G188500 hypothetical protein AT3G27740:CARA:carbamoyl phosphate synthetase A 37
Glyma.05G219800 TRE1 trehalase 1 AT4G24040:TRE1:trehalase 1 37
Glyma.06G260200 hypothetical protein AT1G60690:AT1G60690:NAD(P)-linked oxidoreductase superfamily protein__AT1G60710:ATB2:NAD(P)-linked oxidoreductase superfamily protein__AT1G60680:AT1G60680:NAD(P)-linked oxidoreductase superfamily protein__AT1G10810:AT1G10810:NAD(P)-linked oxidoreductase superfamily protein 37
Glyma.06G284900 BZIP50 bZIP transcription factor bZIP50 AT3G58120:BZIP61:Basic-leucine zipper (bZIP) transcription factor family protein__AT2G42380:BZIP34:Basic-leucine zipper (bZIP) transcription factor family protein 37
Glyma.06G304200 hypothetical protein AT1G04910:AT1G04910:O-fucosyltransferase family protein 37
Glyma.07G067000 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 37
Glyma.08G140900 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 37
Glyma.08G215500 hypothetical protein AT2G22750:AT2G22750:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 37