Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24428 Talniflumate 414.0784 415.0855 205
P25466 Niazinin 343.1126 344.1185 205
P15762 Aristoloterpenate II 527.1950 528.2020 204
P03342 D-Alanyl-alanyl-poly(glycerolphosphate) 314.0858 315.0931 203
P05821 Pandangolide 3 362.1408 363.1478 203
P12578 4E,6E-undecenal 166.1341 167.1417 203
P14723 1-(9Z-octadecenoyl)-2-(5-oxo-7-carboxy-6E-heptenoyl)-sn-glycero-3-phosphoserine 691.3337 692.3416 203
P53229 Leurubicin 656.2476 657.2525 203
P13994 2-Methyl-1-hydroxypropyl-ThPP 496.0955 497.1062 202
P39176 Microtoenin C 941.5023 942.5093 202

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G068100 hypothetical protein NA 38
Glyma.07G074800 hypothetical protein AT3G16840:AT3G16840:P-loop containing nucleoside triphosphate hydrolases superfamily protein 38
Glyma.08G180900 hypothetical protein AT5G64570:XYL4:beta-D-xylosidase 4__AT5G09730:BXL3:beta-xylosidase 3 38
Glyma.10G038400 hypothetical protein NA 38
Glyma.14G178600 hypothetical protein NA 38
Glyma.14G178700 hypothetical protein NA 38
Glyma.16G157800 hypothetical protein NA 38
Glyma.20G108600 hypothetical protein NA 38
Glyma.20G179000 hypothetical protein NA 38
Glyma.01G022800 hypothetical protein AT5G65490:AT5G65490:suppressor-like protein 37