Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55327 8,8''-Biskoenigine 616.2599 617.2636 —
P55329 607.7540 608.7639 —
P55341 Tetraphenylporphyrin 614.2471 615.2555 —
P55343 624.9928 625.9968 —
P55350 609.0479 610.0613 —
P55357 339.0868 340.0942 —
P55361 Aerobactin 564.2333 565.2435 —
P55362 L-gamma-Glutamyl-beta-phenyl-beta-L-alanine 294.1177 295.1250 —
P55363 331.5836 332.5907 —
P55366 Dexrazoxane 268.1177 269.1254 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G109700 GmJ1 AT4G13830:J20:DNAJ-like 20 39
Glyma.08G336900 hypothetical protein AT1G55730:CAX5:cation exchanger 5 39
Glyma.09G004900 hypothetical protein AT4G22030:AT4G22030:F-box protein with a domain protein 39
Glyma.11G000200 hypothetical protein AT1G76670:AT1G76670:Nucleotide-sugar transporter family protein__AT5G42420:AT5G42420:Nucleotide-sugar transporter family protein 39
Glyma.11G163300 WRKY19 WRKY transcription factor 19 NA 39
Glyma.15G262200 hypothetical protein AT3G12760:AT3G12760:defective in cullin neddylation protein 39
Glyma.17G039300 hypothetical protein AT4G15230:ABCG30:pleiotropic drug resistance 2__AT4G15233:ABCG42:ABC-2 and Plant PDR ABC-type transporter family protein__AT4G15215:ABCG41:pleiotropic drug resistance 13 39
Glyma.18G202600 FAD7-1 omega-3 fatty acid desaturase NA 39
Glyma.03G171500 hypothetical protein AT3G53720:CHX20:cation/H+ exchanger 20 38
Glyma.05G122300 hypothetical protein AT3G60360:EDA14:embryo sac development arrest 14 38