Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09497 2,5-Dimethylfuran 96.0575 97.0642 193
P10553 299.1808 300.1868 193
P18019 AH 135Y 291.1104 292.1177 193
P29144 2-Hexyl-5-methyl-3(2H)-furanone 182.1294 183.1365 193
P37333 Xanthobaccin C 494.2826 495.2901 193
P40190 Tasumatrol F 632.2808 633.2882 193
P40307 Dolaconine 419.2601 420.2671 193
P00145 Limonenecarboxylic acid 180.1121 181.1181 192
P01028 Lamiridosin A 260.0890 261.0946 192
P03908 438.5879 439.5923 192

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G109700 GmJ1 AT4G13830:J20:DNAJ-like 20 39
Glyma.08G336900 hypothetical protein AT1G55730:CAX5:cation exchanger 5 39
Glyma.09G004900 hypothetical protein AT4G22030:AT4G22030:F-box protein with a domain protein 39
Glyma.11G000200 hypothetical protein AT1G76670:AT1G76670:Nucleotide-sugar transporter family protein__AT5G42420:AT5G42420:Nucleotide-sugar transporter family protein 39
Glyma.11G163300 WRKY19 WRKY transcription factor 19 NA 39
Glyma.15G262200 hypothetical protein AT3G12760:AT3G12760:defective in cullin neddylation protein 39
Glyma.17G039300 hypothetical protein AT4G15230:ABCG30:pleiotropic drug resistance 2__AT4G15233:ABCG42:ABC-2 and Plant PDR ABC-type transporter family protein__AT4G15215:ABCG41:pleiotropic drug resistance 13 39
Glyma.18G202600 FAD7-1 omega-3 fatty acid desaturase NA 39
Glyma.03G171500 hypothetical protein AT3G53720:CHX20:cation/H+ exchanger 20 38
Glyma.05G122300 hypothetical protein AT3G60360:EDA14:embryo sac development arrest 14 38