Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P00788 Tyrphostin B42 294.0991 295.1079 199
P07827 809.2516 810.2565 199
P14487 Yuzurimine E 429.2528 430.2610 199
P42503 121.9563 122.9631 199
P50354 Nodulisporic acid C2 701.4348 702.4409 199
P54402 Catuabine E 371.1815 372.1888 199
P26744 FR901537 507.1481 508.1541 198
P04642 Aminoacylase 536.2172 537.2249 197
P15145 Geodiamolide M 609.2125 610.2230 197
P33997 615.3757 616.3848 197

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G109700 GmJ1 AT4G13830:J20:DNAJ-like 20 39
Glyma.08G336900 hypothetical protein AT1G55730:CAX5:cation exchanger 5 39
Glyma.09G004900 hypothetical protein AT4G22030:AT4G22030:F-box protein with a domain protein 39
Glyma.11G000200 hypothetical protein AT1G76670:AT1G76670:Nucleotide-sugar transporter family protein__AT5G42420:AT5G42420:Nucleotide-sugar transporter family protein 39
Glyma.11G163300 WRKY19 WRKY transcription factor 19 NA 39
Glyma.15G262200 hypothetical protein AT3G12760:AT3G12760:defective in cullin neddylation protein 39
Glyma.17G039300 hypothetical protein AT4G15230:ABCG30:pleiotropic drug resistance 2__AT4G15233:ABCG42:ABC-2 and Plant PDR ABC-type transporter family protein__AT4G15215:ABCG41:pleiotropic drug resistance 13 39
Glyma.18G202600 FAD7-1 omega-3 fatty acid desaturase NA 39
Glyma.03G171500 hypothetical protein AT3G53720:CHX20:cation/H+ exchanger 20 38
Glyma.05G122300 hypothetical protein AT3G60360:EDA14:embryo sac development arrest 14 38