Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55250 624.9316 625.9393 —
P55251 283.2792 284.2855 —
P55252 N1,N5,N10-Tricaffeoyl spermidine 631.2498 632.2512 —
P55253 608.9013 609.9125 —
P55258 608.9253 609.9268 —
P55259 608.6906 609.6976 —
P55260 624.9479 625.9558 —
P55262 6-Ketomyristic acid 242.1902 243.1973 —
P55265 Morellic acid 560.2383 561.2470 —
P55271 541.2613 542.2687 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G014300 hypothetical protein NA 40
Glyma.07G035100 hypothetical protein NA 40
Glyma.08G114600 hypothetical protein NA 40
Glyma.08G220200 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 40
Glyma.08G300000 hypothetical protein NA 40
Glyma.16G207800 hypothetical protein AT4G15093:LigB:catalytic LigB subunit of aromatic ring-opening dioxygenase family 40
Glyma.18G247000 hypothetical protein NA 40
Glyma.01G230400 hypothetical protein AT2G40935:AT2G40935:PLAC8 family protein 39
Glyma.03G041500 hypothetical protein NA 39
Glyma.06G309400 hypothetical protein AT5G07040:AT5G07040:RING/U-box superfamily protein 39