Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55217 Cryptophycin 52 668.2910 669.3012 —
P55219 Anadur 506.3390 507.3476 —
P55221 609.0220 610.0260 —
P55224 Hicksoane C 608.0116 609.0195 —
P55225 Haloxyline B 435.3725 436.3803 —
P55226 690.1733 691.1811 —
P55227 Pectenol A 582.4057 583.4119 —
P55228 609.6882 610.6931 —
P55232 609.7950 610.7988 —
P55233 667.3010 668.3098 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G211600 hypothetical protein NA 41
Glyma.18G264000 hypothetical protein AT3G29270:AT3G29270:RING/U-box superfamily protein 41
Glyma.18G268000 hypothetical protein NA 41
Glyma.02G067600 hypothetical protein NA 40
Glyma.07G010200 hypothetical protein NA 40
Glyma.07G010500 hypothetical protein AT1G55150:RH20:DEA(D/H)-box RNA helicase family protein 40
Glyma.07G010800 hypothetical protein NA 40
Glyma.07G010900 hypothetical protein AT1G55180:PLDEPSILON:phospholipase D alpha 4 40
Glyma.07G011200 hypothetical protein AT5G49010:SLD5:DNA replication protein-like protein 40
Glyma.07G011600 hypothetical protein AT3G21250:ABCC8:multidrug resistance-associated protein 6 40