Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55446 1-(4-Hydroxyphenyl)-4,8-dimethyl-10-(2,6,6-trimethylcyclohexen-1-yl)deca-3,5,7,9-tetraen-2-one 390.2571 391.2651 —
P55448 Myrrhanol A 460.3838 461.3899 —
P55449 1-(3,4-Dichlorophenyl)urea 203.9825 204.9901 —
P55452 Flunixin 296.0745 297.0820 —
P55455 557.1670 558.1718 —
P55456 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1027 503.1103 —
P55458 Rosmadial 344.1611 345.1687 —
P55459 7-Methyl-6,8-bis(methylthio)pyrrolo(1,2-a)pyrazine 224.0408 225.0488 —
P55460 Propyl 1-(propylsulfinyl)propyl disulfide 240.0673 241.0731 —
P55461 Losmapimod 383.1986 384.2078 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G194100 hypothetical protein AT5G58620:AT5G58620:zinc finger (CCCH-type) family protein 42
Glyma.17G144000 hypothetical protein AT4G16760:ACX1:acyl-CoA oxidase 1 42
Glyma.17G144400 hypothetical protein NA 42
Glyma.18G104600 hypothetical protein AT2G42810:PP5.2:protein phosphatase 5.2 42
Glyma.20G123100 hypothetical protein AT2G01110:APG2:Sec-independent periplasmic protein translocase 42
Glyma.02G202100 hypothetical protein AT3G52610:AT3G52610:GATA zinc finger protein 41
Glyma.02G273700 hypothetical protein AT5G21040:FBX2:F-box protein 2 41
Glyma.03G135200 hypothetical protein NA 41
Glyma.06G293700 hypothetical protein AT2G20740:AT2G20740:Tetraspanin family protein 41
Glyma.07G094200 hypothetical protein NA 41