Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P31675 N-Deisopropyl-fluvastatin 369.1340 370.1426 184
P34634 1-(4-Hydroxy-3,5-dimethoxyphenyl)-7-(4-hydroxy-3-methoxyphenyl)-3,5-heptanediol 406.1959 407.2047 184
P38526 509.1856 510.1928 184
P46681 Selanc 751.4280 752.4357 184
P46758 Cyclovirobuxeine F 560.3627 561.3709 184
P06565 N-[(5-{2-[(6R)-2-Amino-4-oxo-3,4,5,6,7,8-hexahydropyrido[2,3-D]pyrimidin-6-YL]ethyl}-2-thienyl)carbonyl]-L-glutamic acid 449.1443 450.1521 183
P13918 Trifuhalol B 390.0568 391.0648 183
P15055 alpha-(Dimethylaminomethyl)-2-(3-ethyl-5-methyl-4-isoxazolyl)-1H-indole-3-methanol 313.1763 314.1834 183
P15192 Mycalolide A 908.4443 909.4491 183
P20611 cis-1,2-Dihydroxy-1,2-dihydro-7-hydroxymethylnaphthalene 192.0788 193.0851 183

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G194100 hypothetical protein AT5G58620:AT5G58620:zinc finger (CCCH-type) family protein 42
Glyma.17G144000 hypothetical protein AT4G16760:ACX1:acyl-CoA oxidase 1 42
Glyma.17G144400 hypothetical protein NA 42
Glyma.18G104600 hypothetical protein AT2G42810:PP5.2:protein phosphatase 5.2 42
Glyma.20G123100 hypothetical protein AT2G01110:APG2:Sec-independent periplasmic protein translocase 42
Glyma.02G202100 hypothetical protein AT3G52610:AT3G52610:GATA zinc finger protein 41
Glyma.02G273700 hypothetical protein AT5G21040:FBX2:F-box protein 2 41
Glyma.03G135200 hypothetical protein NA 41
Glyma.06G293700 hypothetical protein AT2G20740:AT2G20740:Tetraspanin family protein 41
Glyma.07G094200 hypothetical protein NA 41