Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54369 Norplicacetin 503.2359 504.2432 —
P54373 Acutifolidine 371.1757 372.1852 —
P54374 Variecolorin H 353.1725 354.1821 —
P54378 Unanisoflavan 370.1780 371.1867 —
P54379 1-(3,4-Dichlorophenyl)urea 203.9836 204.9902 —
P54380 N,N-(2,2-dihydroxy-ethyl)-5Z,8Z,11Z,14Z-eicosatetraenoyl amine 391.3033 392.3095 —
P54381 473.3840 474.3911 —
P54382 240.8763 241.8835 —
P54383 Phthalic anhydride 148.0144 149.0224 —
P54384 335.1442 336.1518 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G095000 hypothetical protein NA 1,218
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1,192
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1,190
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1,175
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 1,171
Glyma.19G011600 hypothetical protein NA 1,164
Glyma.16G111100 hypothetical protein NA 1,160
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1,158
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1,144
Glyma.01G120000 hypothetical protein NA 1,142