Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P26553 CD 1790 473.2195 474.2258 97
P27525 Burkinabin B 492.1288 493.1343 97
P29651 Destruxin E diol 611.3514 612.3581 97
P30726 Styrene 104.0616 105.0691 97
P31878 Stryspinolactone 272.0872 273.0951 97
P34787 Thiocyanatin E1 374.2072 375.2156 97
P34966 Cernuine 262.2014 263.2082 97
P35108 Protoverine 525.2899 526.2966 97
P41286 4-Hydroxytrideca-7,10-dienoylcarnitine 369.2541 370.2637 97
P41726 PA(8:0/22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)) 640.3355 641.3461 97

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G095000 hypothetical protein NA 1,218
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1,192
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1,190
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1,175
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 1,171
Glyma.19G011600 hypothetical protein NA 1,164
Glyma.16G111100 hypothetical protein NA 1,160
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1,158
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1,144
Glyma.01G120000 hypothetical protein NA 1,142