Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P45656 Aglain B 630.2840 631.2925 117
P45744 366.6513 367.6565 117
P53375 N(6)-Monobutyryladenosine 337.1396 338.1472 117
P53643 662.1493 663.1566 117
P54509 n2-Acetyl,n6-methyllysine 202.1324 203.1390 117
P04587 Methionyl-Glutamate 278.0937 279.1010 116
P13464 Tripterygiumine T 693.2310 694.2329 116
P17580 Swietenidin B 205.0721 206.0796 116
P22655 Candoxatrilat 399.2293 400.2366 116
P25819 Thonzylamine 286.1743 287.1822 116

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G095000 hypothetical protein NA 1,218
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1,192
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1,190
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1,175
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 1,171
Glyma.19G011600 hypothetical protein NA 1,164
Glyma.16G111100 hypothetical protein NA 1,160
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1,158
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1,144
Glyma.01G120000 hypothetical protein NA 1,142